/*
 * index.h
 *
 *  Created on: Nov 8, 2013
 *      Author: jiang
 */

#ifndef INDEX_H_
#define INDEX_H_


#include <stdint.h>
#include "seqio.h"



#ifdef __cplusplus
extern "C" {
#endif
	int dmap_index_ref(const char*refFile, opt_t *op);
#ifdef __cplusplus
}
#endif


#endif /* INDEX_H_ */
